Transcript: lnc-NPHP4-7:1

Basic information

LNCipedia transcript ID: lnc-NPHP4-7:1 
LNCipedia gene ID: lnc-NPHP4-7
Location (hg38): chr1:4986319-4990759
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 449 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT000594
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -140.0578 non-coding 
CPAT coding probability 0.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NPHP4-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NPHP4-7:1
4.0 lnc-NPHP4-7:1
4.1 lnc-NPHP4-7:1
5.0 lnc-NPHP4-7:1
5.1 lnc-CLSTN1-68:1
5.2 lnc-NPHP4-7:1