Transcript: lnc-NPHS2-7:4

Basic information

LNCipedia transcript ID: lnc-NPHS2-7:4 
LNCipedia gene ID: lnc-NPHS2-7
Location (hg38): chr1:179864996-179865377
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 382 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT008220
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 9.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NPHS2-7:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AL359853.2-1:4
4.0 lnc-AL359853.2-1:4
4.1 lnc-AL359853.2-1:4
5.0 lnc-AL359853.2-1:4
5.1 lnc-SH2D1B-182:4
5.2 lnc-NPHS2-7:4