Transcript: lnc-NPIPA7-1:1

Basic information

LNCipedia transcript ID: lnc-NPIPA7-1:1 
LNCipedia gene ID: lnc-NPIPA7-1
Location (hg38): chr16:16455625-16457124
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 204 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00024338; NONHSAT140797
Alternative gene names: XLOC_011654; linc-TMC7-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -201.2545 non-coding 
CPAT coding probability 0.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NPIPA7-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-467M13.1.1-1:1
3.1 lnc-RP11-467M13.1.1-1:1
4.0 lnc-RP11-467M13.1.1-1:1
4.1 lnc-RP11-467M13.1.1-1:1
5.0 lnc-RP11-467M13.1.1-1:1
5.1 lnc-MPV17L-22:1
5.2 lnc-NPIPA7-1:1