Transcript: lnc-NPIPA7-4:1

Basic information

LNCipedia transcript ID: lnc-NPIPA7-4:1 
LNCipedia gene ID: lnc-NPIPA7-4
Location (hg38): chr16:16357089-16358103
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 897 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA491:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -102.5763 non-coding 
CPAT coding probability 43.22% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NPIPA7-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AC138969.4.1-4:1
4.1 lnc-AC138969.4.1-4:1
5.0 lnc-AC138969.4.1-4:1
5.1 lnc-MPV17L-20:1
5.2 lnc-NPIPA7-4:1