Transcript: lnc-NPIPA8-7:4

Basic information

LNCipedia transcript ID: lnc-NPIPA8-7:4 
LNCipedia gene ID: lnc-NPIPA8-7
Location (hg38): chr16:17856118-17972501
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3702 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259929.1|MICT00000128058.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -53.0212 non-coding 
CPAT coding probability 1.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NPIPA8-7:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-1212A22.2.1-2:4
5.0 lnc-RP11-1212A22.2.1-2:4
5.1 lnc-MARF1-29:4
5.2 lnc-NPIPA8-7:4