Transcript: lnc-NPIPA8-7:5

Basic information

LNCipedia transcript ID: lnc-NPIPA8-7:5 
LNCipedia gene ID: lnc-NPIPA8-7
Location (hg38): chr16:17933189-17972501
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 405 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000259929.1|ENST00000569048.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -224.8448 non-coding 
CPAT coding probability 1.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NPIPA8-7:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-1212A22.2.1-2:5
5.0 lnc-RP11-1212A22.2.1-2:5
5.1 lnc-MARF1-29:5
5.2 lnc-NPIPA8-7:5