Transcript: lnc-NPIPB6-1:3

Basic information

LNCipedia transcript ID: lnc-NPIPB6-1:3 
LNCipedia gene ID: lnc-NPIPB6-1
Location (hg38): chr16:28284885-28292065
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2482 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000246465.1|ENST00000501520.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.4653 non-coding 
CPAT coding probability 5.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NPIPB6-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RP11-57A19.3.1-1:4
5.0 lnc-RP11-57A19.3.1-1:4
5.1 lnc-SULT1A2-12:3
5.2 lnc-NPIPB6-1:3