Transcript: lnc-NPTX1-1:4

Basic information

LNCipedia transcript ID: lnc-NPTX1-1:4 
LNCipedia gene ID: lnc-NPTX1-1
Location (hg38): chr17:80450587-80454712
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4126 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000260369.2|MICT00000156187.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -15.3176 non-coding 
CPAT coding probability 95.36% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NPTX1-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NPTX1-1:4
5.0 lnc-NPTX1-1:4
5.1 lnc-SGSH-12:4
5.2 lnc-NPTX1-1:4