Transcript: lnc-NPY5R-3:2

Basic information

LNCipedia transcript ID: lnc-NPY5R-3:2 
LNCipedia gene ID: lnc-NPY5R-3
RefSeq ID: NR_125888
Location (hg38): chr4:162022733-162047550
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1088 bp
Exons: 6
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125888; NR_125888.1
Alternative gene names: LOC101928052


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.3786 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NPY5R-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NPY5R-3:2
4.0 lnc-NPY5R-3:2
4.1 lnc-NPY5R-3:2
5.0 lnc-NPY5R-3:2
5.1 lnc-TMEM144-23:2
5.2 lnc-NPY5R-3:2