Transcript: lnc-NR1D1-2:2

Basic information

LNCipedia transcript ID: lnc-NR1D1-2:2 
LNCipedia gene ID: lnc-NR1D1-2
Location (hg38): chr17:40139139-40140184
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1046 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000033626.1|FTMT26600002019.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 8.9612 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NR1D1-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NR1D1-2:2
5.0 lnc-NR1D1-2:2
5.1 lnc-NR1D1-2:2
5.2 lnc-NR1D1-2:2