Transcript: lnc-NR2F2-15:1

Basic information

LNCipedia transcript ID: lnc-NR2F2-15:1 
LNCipedia gene ID: lnc-NR2F2-15
Ensembl Gene ID: ENSG00000278146
Ensembl Transcript ID: ENST00000612923
Location (hg38): chr15:96230897-96231145
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 249 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000612923.1
Alternative gene names: ENSG00000278146.1; RP11-327J17.8; AC012409.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -216.7745 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NR2F2-15:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-NR2F2-15:1
4.1 lnc-NR2F2-15:1
5.0 lnc-NR2F2-15:1
5.1 lnc-ARRDC4-45:1
5.2 lnc-NR2F2-15:1