Transcript: lnc-NR2F2-2:2

Basic information

LNCipedia transcript ID: lnc-NR2F2-2:2 
LNCipedia gene ID: lnc-NR2F2-2
Location (hg38): chr15:96354390-96390723
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 563 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000558499.1; RP11-522B15.3-002; OTTHUMT00000415392.1; NONHSAT050247
Alternative gene names: ENSG00000259275.1; RP11-522B15.3; OTTHUMG00000171847.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -104.7561 non-coding 
CPAT coding probability 0.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NR2F2-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NR2F2-2:2
4.0 lnc-NR2F2-2:2
4.1 lnc-NR2F2-2:2
5.0 lnc-NR2F2-2:2
5.1 lnc-ARRDC4-41:5
5.2 lnc-NR2F2-2:2