Transcript: lnc-NR3C1-3:1

Basic information

LNCipedia transcript ID: lnc-NR3C1-3:1 
LNCipedia gene ID: lnc-NR3C1-3
Location (hg38): chr5:143241689-143244523
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2835 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000081496.1|ENCT00000363596.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -99.6419 non-coding 
CPAT coding probability 5.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NR3C1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NR3C1-3:1
5.0 lnc-NR3C1-3:1
5.1 lnc-DIAPH1-35:1
5.2 lnc-NR3C1-3:1