Transcript: lnc-NR5A1-8:1

Basic information

LNCipedia transcript ID: lnc-NR5A1-8:1 
LNCipedia gene ID: lnc-NR5A1-8
Location (hg38): chr9:124568244-124711186
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2110 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000109763.1|ENCT00000460799.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -80.7491 non-coding 
CPAT coding probability 0.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NR5A1-8:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NR5A1-8:1
5.0 lnc-NR5A1-8:1
5.1 lnc-ZBTB6-39:1
5.2 lnc-NR5A1-8:1