Transcript: lnc-NR5A2-1:11

Basic information

LNCipedia transcript ID: lnc-NR5A2-1:11 
LNCipedia gene ID: lnc-NR5A2-1
Location (hg38): chr1:200411802-200413003
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1202 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000230623.2|FTMT20400009908.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -24.6531 non-coding 
CPAT coding probability 0.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NR5A2-1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NR5A2-1:11
5.0 lnc-NR5A2-1:11
5.1 lnc-ADORA1-75:7
5.2 lnc-NR5A2-1:11