Transcript: lnc-NRIP1-15:1

Basic information

LNCipedia transcript ID: lnc-NRIP1-15:1 
LNCipedia gene ID: lnc-NRIP1-15
Location (hg38): chr21:15219691-15224468
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 920 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000056402.1|MICT00000223582.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -213.8943 non-coding 
CPAT coding probability 6.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NRIP1-15:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NRIP1-15:1
5.0 lnc-NRIP1-15:1
5.1 lnc-N6AMT1-105:2
5.2 lnc-NRIP1-15:1