Transcript: lnc-NRIP1-2:4

Basic information

LNCipedia transcript ID: lnc-NRIP1-2:4 
LNCipedia gene ID: lnc-NRIP1-2
Ensembl Gene ID: ENSG00000229425
Ensembl Transcript ID: ENST00000634644
Location (hg38): chr21:15370500-15627258
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1513 bp
Exons: 12
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000634644.1
Alternative gene names: ENSG00000229425.2; AJ006998.2; AJ009632.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -27.1119 non-coding 
CPAT coding probability 3.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NRIP1-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-NRIP1-2:4
4.1 lnc-NRIP1-2:4
5.0 lnc-NRIP1-2:4
5.1 lnc-N6AMT1-103:5
5.2 lnc-NRIP1-2:4