Transcript: lnc-NRIP2-9:1

Basic information

LNCipedia transcript ID: lnc-NRIP2-9:1 
LNCipedia gene ID: lnc-NRIP2-9
Location (hg38): chr12:2631461-2641930
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 571 bp
Exons: 5
Sources: Nielsen et al.,2014
Alternative transcript names: refGeneNc_4286_NR_033958
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.0677 non-coding 
CPAT coding probability 2.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NRIP2-9:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NRIP2-9:1
4.0 lnc-NRIP2-9:1
4.1 lnc-NRIP2-9:1
5.0 lnc-NRIP2-9:1
5.1 lnc-CHD4-99:1
5.2 lnc-NRIP2-9:1