Transcript: lnc-NSUN6-8:2

Basic information

LNCipedia transcript ID: lnc-NSUN6-8:2 
LNCipedia gene ID: lnc-NSUN6-8
Location (hg38): chr10:19721697-19728550
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 823 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000431157.1; RP11-354E11.2-002; OTTHUMT00000047095.1
Alternative gene names: ENSG00000233968.1; RP11-354E11.2; OTTHUMG00000017777.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -113.2304 non-coding 
CPAT coding probability 3.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NSUN6-8:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NEBL-2:1
4.0 lnc-NEBL-2:1
4.1 lnc-NEBL-2:1
5.0 lnc-NEBL-2:1
5.1 lnc-MPP7-112:2
5.2 lnc-NSUN6-8:2