Transcript: lnc-NSUN6-8:4

Basic information

LNCipedia transcript ID: lnc-NSUN6-8:4 
LNCipedia gene ID: lnc-NSUN6-8
Ensembl Gene ID: ENSG00000233968
Ensembl Transcript ID: ENST00000431157
Location (hg38): chr10:19721588-19728550
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 932 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT011667; ENST00000431157.2; ENST00000431157.6
Alternative gene names: ENSG00000233968.2; RP11-354E11.2; ENSG00000233968.6; AL157895.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -113.2304 non-coding 
CPAT coding probability 3.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NSUN6-8:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NEBL-2:4
4.0 lnc-NEBL-2:4
4.1 lnc-NEBL-2:4
5.0 lnc-NEBL-2:4
5.1 lnc-MPP7-112:4
5.2 lnc-NSUN6-8:4