Transcript: lnc-NSUN6-8:5

Basic information

LNCipedia transcript ID: lnc-NSUN6-8:5 
LNCipedia gene ID: lnc-NSUN6-8
RefSeq ID: NR_120646
Location (hg38): chr10:19710335-19728550
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1397 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120646; NR_120646.1
Alternative gene names: LOC101928834


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -15.4992 non-coding 
CPAT coding probability 14.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NSUN6-8:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NEBL-2:5
4.0 lnc-NEBL-2:5
4.1 lnc-NEBL-2:5
5.0 lnc-NEBL-2:5
5.1 lnc-MPP7-112:5
5.2 lnc-NSUN6-8:5