Transcript: lnc-NTAN1-3:1

Basic information

LNCipedia transcript ID: lnc-NTAN1-3:1 
LNCipedia gene ID: lnc-NTAN1-3
RefSeq ID: NR_103772
Location (hg38): chr16:14925750-14927283
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1076 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT140724; NR_103772; NR_103772.1
Alternative gene names: LOC100288162


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 78.3901 coding 
CPAT coding probability 74.11% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NTAN1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NTAN1-3:1
4.0 lnc-NTAN1-3:1
4.1 lnc-NTAN1-3:1
5.0 lnc-NTAN1-3:1
5.1 lnc-PARN-20:1
5.2 lnc-NTAN1-3:1