Transcript: lnc-NTM-6:1

Basic information

LNCipedia transcript ID: lnc-NTM-6:1 
LNCipedia gene ID: lnc-NTM-6
Location (hg38): chr11:131067485-131087602
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 756 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019541; NONHSAT025159
Alternative gene names: XLOC_009335; linc-NTM-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -122.0637 non-coding 
CPAT coding probability 11.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NTM-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NTM-6:1
3.1 lnc-NTM-6:1
4.0 lnc-NTM-6:1
4.1 lnc-NTM-6:1
5.0 lnc-NTM-6:1
5.1 lnc-JAM3-22:2
5.2 lnc-NTM-6:1