Transcript: lnc-NTMT1-4:6

Basic information

LNCipedia transcript ID: lnc-NTMT1-4:6 
LNCipedia gene ID: lnc-NTMT1-4
Location (hg38): chr9:129437500-129438620
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 808 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00016185; NONHSAT135064
Alternative gene names: XLOC_007586; linc-METTL11A-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -66.5556 non-coding 
CPAT coding probability 3.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NTMT1-4:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-METTL11A-2:1
3.1 lnc-METTL11A-4:1
4.0 lnc-METTL11A-4:1
4.1 lnc-METTL11A-4:1
5.0 lnc-METTL11A-4:1
5.1 lnc-PTPA-19:6
5.2 lnc-NTMT1-4:6