Transcript: lnc-NTSR2-5:2

Basic information

LNCipedia transcript ID: lnc-NTSR2-5:2 
LNCipedia gene ID: lnc-NTSR2-5
Ensembl Gene ID: ENSG00000225649
Ensembl Transcript ID: ENST00000425974
Location (hg38): chr2:12966784-13007013
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1942 bp
Exons: 6
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000425974; ENST00000425974.1; AC064875.2-001; OTTHUMT00000323587.1; ENST00000425974.5
Alternative gene names: ENSG00000225649; AC064875.2; ENSG00000225649.1; OTTHUMG00000151711.1; ENSG00000225649.5; AC064875.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -168.1353 non-coding 
CPAT coding probability 4.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NTSR2-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NTSR2-3:3
3.1 lnc-NTSR2-5:2
4.0 lnc-NTSR2-5:2
4.1 lnc-NTSR2-5:2
5.0 lnc-NTSR2-5:2
5.1 lnc-RAD51AP2-66:3
5.2 lnc-NTSR2-5:2