Transcript: lnc-NTSR2-5:3

Basic information

LNCipedia transcript ID: lnc-NTSR2-5:3 
LNCipedia gene ID: lnc-NTSR2-5
Location (hg38): chr2:12966787-13007013
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1939 bp
Exons: 6
Sources: Broad Institute
Alternative transcript names: TCONS_00002746
Alternative gene names: XLOC_001992; linc-NTSR2-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -168.1353 non-coding 
CPAT coding probability 4.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NTSR2-5:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NTSR2-3:2
3.1 lnc-NTSR2-5:3
4.0 lnc-NTSR2-5:3
4.1 lnc-NTSR2-5:3
5.0 lnc-NTSR2-5:3
5.1 lnc-RAD51AP2-66:2
5.2 lnc-NTSR2-5:3