Transcript: lnc-NTSR2-5:9

Basic information

LNCipedia transcript ID: lnc-NTSR2-5:9 
LNCipedia gene ID: lnc-NTSR2-5
RefSeq ID: NR_038434
Location (hg38): chr2:12966782-13007013
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1944 bp
Exons: 6
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT069236; NR_038434; NR_038434.1
Alternative gene names: LOC100506474


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -168.1353 non-coding 
CPAT coding probability 4.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NTSR2-5:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NTSR2-5:9
4.0 lnc-NTSR2-5:9
4.1 lnc-NTSR2-5:9
5.0 lnc-NTSR2-5:9
5.1 lnc-RAD51AP2-66:4
5.2 lnc-NTSR2-5:9