Transcript: lnc-NUDT12-3:10

Basic information

LNCipedia transcript ID: lnc-NUDT12-3:10 
LNCipedia gene ID: lnc-NUDT12-3
Ensembl Gene ID: ENSG00000283462
Ensembl Transcript ID: ENST00000637345
Location (hg38): chr5:103880321-103891360
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1766 bp
Exons: 3
Sources: Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000637345.1
Alternative gene names: ENSG00000283462.1; CTC-445B21.1; AC008505.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -242.815 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NUDT12-3:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NUDT12-3:10
5.0 lnc-NUDT12-3:10
5.1 lnc-LOX-167:8
5.2 lnc-NUDT12-3:10