Transcript: lnc-NUDT8-3:2

Basic information

LNCipedia transcript ID: lnc-NUDT8-3:2 
LNCipedia gene ID: lnc-NUDT8-3
Ensembl Gene ID: ENSG00000184224
Ensembl Transcript ID: ENST00000446232
Location (hg38): chr11:67604053-67605964
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1126 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000446232.1
Alternative gene names: ENSG00000184224.3; C11orf72


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -1.1835 non-coding 
CPAT coding probability 88.49% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NUDT8-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C11orf72-2:2
4.1 lnc-C11orf72-2:2
5.0 lnc-C11orf72-2:2
5.1 lnc-ALDH3B2-2:3
5.2 lnc-NUDT8-3:2