Transcript: lnc-NUMB-1:5

Basic information

LNCipedia transcript ID: lnc-NUMB-1:5 
LNCipedia gene ID: lnc-NUMB-1
Ensembl Gene ID: ENSG00000284930
Ensembl Transcript ID: ENST00000643731
Location (hg38): chr14:73459009-73463585
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 497 bp
Exons: 3
Sources: Broad Institute; NONCODE v4; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00022788; NONHSAT037703; ENST00000643731.1
Alternative gene names: XLOC_011068; linc-NUMB; ENSG00000284930.1; AC005280.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -232.9959 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NUMB-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NUMB-1:5
3.1 lnc-NUMB-1:5
4.0 lnc-NUMB-1:5
4.1 lnc-NUMB-1:5
5.0 lnc-NUMB-1:5
5.1 lnc-ABCD4-23:11
5.2 lnc-NUMB-1:5