Transcript: lnc-NUMB-3:3

Basic information

LNCipedia transcript ID: lnc-NUMB-3:3 
LNCipedia gene ID: lnc-NUMB-3
Ensembl Gene ID: ENSG00000258376
Ensembl Transcript ID: ENST00000554614
Location (hg38): chr14:73242651-73245979
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3050 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000554614.2
Alternative gene names: ENSG00000258376.2; RP4-647C14.2; AC004846.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -32.2427 non-coding 
CPAT coding probability 1.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NUMB-3:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-NUMB-3:3
4.1 lnc-NUMB-3:3
5.0 lnc-NUMB-3:3
5.1 lnc-ABCD4-26:4
5.2 lnc-NUMB-3:3