Transcript: lnc-NUP62-1:17

Basic information

LNCipedia transcript ID: lnc-NUP62-1:17 
LNCipedia gene ID: lnc-NUP62-1
Location (hg38): chr19:49887382-49929529
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 797 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT067277
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 323.9058 coding 
CPAT coding probability 30.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NUP62-1:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NUP62-1:3
4.0 lnc-IL4I1-1:5
4.1 lnc-IL4I1-1:5
5.0 lnc-IL4I1-1:5
5.1 lnc-NOSIP-22:4
5.2 lnc-NUP62-1:17