Transcript: lnc-NUPR2-3:3

Basic information

LNCipedia transcript ID: lnc-NUPR2-3:3 
LNCipedia gene ID: lnc-NUPR2-3
Location (hg38): chr7:56477595-56483913
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 614 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT120756; FPKM1_group_29776_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 16.2079 non-coding 
CPAT coding probability 1.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NUPR2-3:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP4-725G10.1.1-3:6
4.0 lnc-RP4-725G10.1.1-3:6
4.1 lnc-RP4-725G10.1.1-3:6
5.0 lnc-RP4-725G10.1.1-3:6
5.1 lnc-PSPH-10:3
5.2 lnc-NUPR2-3:3