Transcript: lnc-NUPR2-3:4

Basic information

LNCipedia transcript ID: lnc-NUPR2-3:4 
LNCipedia gene ID: lnc-NUPR2-3
RefSeq ID: NR_108095
Location (hg38): chr7:56482105-56483319
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 697 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_108095; NR_108095.1
Alternative gene names: LOC100240728


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -29.7823 non-coding 
CPAT coding probability 5.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NUPR2-3:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP4-725G10.1.1-3:7
4.0 lnc-RP4-725G10.1.1-3:7
4.1 lnc-RP4-725G10.1.1-3:7
5.0 lnc-RP4-725G10.1.1-3:7
5.1 lnc-PSPH-10:4
5.2 lnc-NUPR2-3:4