Transcript: lnc-NUTM2E-1:4

Basic information

LNCipedia transcript ID: lnc-NUTM2E-1:4 
LNCipedia gene ID: lnc-NUTM2E-1
Ensembl Gene ID: ENSG00000272447
Ensembl Transcript ID: ENST00000605920
RefSeq ID: NR_029407
Location (hg38): chr10:79825902-79827602
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1701 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT015193; NR_029407; ENST00000605920.1; NR_029407.1
Alternative gene names: ENSG00000272447.1; RP11-182L21.6; AL135925.1; LOC642361


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 141.3668 coding 
CPAT coding probability 18.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NUTM2E-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM22E-1:7
4.0 lnc-FAM22E-1:7
4.1 lnc-FAM22E-1:7
5.0 lnc-FAM22E-1:7
5.1 lnc-MTRNR2L5-247:4
5.2 lnc-NUTM2E-1:4