Transcript: lnc-NUTM2E-1:6

Basic information

LNCipedia transcript ID: lnc-NUTM2E-1:6 
LNCipedia gene ID: lnc-NUTM2E-1
Location (hg38): chr10:79826703-79841572
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3272 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000431300.2; RP11-182L21.2-001; OTTHUMT00000049008.2; NONHSAT015194
Alternative gene names: ENSG00000224428.2; RP11-182L21.2; OTTHUMG00000018587.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 27.6799 non-coding 
CPAT coding probability 71.03% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NUTM2E-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM22E-1:1
4.0 lnc-FAM22E-1:1
4.1 lnc-FAM22E-1:1
5.0 lnc-FAM22E-1:1
5.1 lnc-MTRNR2L5-247:6
5.2 lnc-NUTM2E-1:6