Transcript: lnc-NUTM2E-1:9

Basic information

LNCipedia transcript ID: lnc-NUTM2E-1:9 
LNCipedia gene ID: lnc-NUTM2E-1
Location (hg38): chr10:79839061-79840248
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 676 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00018253; NONHSAT015196
Alternative gene names: XLOC_008530; linc-C10orf57-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.3771 non-coding 
CPAT coding probability 2.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NUTM2E-1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM22E-1:1
3.1 lnc-FAM22E-1:3
4.0 lnc-FAM22E-1:3
4.1 lnc-FAM22E-1:3
5.0 lnc-FAM22E-1:3
5.1 lnc-MTRNR2L5-247:9
5.2 lnc-NUTM2E-1:9