Transcript: lnc-NUTM2G-6:1

Basic information

LNCipedia transcript ID: lnc-NUTM2G-6:1 
LNCipedia gene ID: lnc-NUTM2G-6
Ensembl Gene ID: ENSG00000224848
Ensembl Transcript ID: ENST00000423924
Location (hg38): chr9:96687056-96721121
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 425 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000423924; ENST00000423924.1; RP11-535M15.1-001; OTTHUMT00000053285.1
Alternative gene names: ENSG00000224848; RP11-535M15.1; ENSG00000224848.1; OTTHUMG00000020301.1; AL589843.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 39.5286 non-coding 
CPAT coding probability 3.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NUTM2G-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HABP4-1:1
3.1 lnc-HABP4-3:1
4.0 lnc-FAM22G-3:1
4.1 lnc-FAM22G-3:1
5.0 lnc-FAM22G-3:1
5.1 lnc-FAM120A-95:1
5.2 lnc-NUTM2G-6:1