Transcript: lnc-NXNL1-7:1

Basic information

LNCipedia transcript ID: lnc-NXNL1-7:1 
LNCipedia gene ID: lnc-NXNL1-7
Location (hg38): chr19:17506223-17511955
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4619 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000269439.1|ENCT00000212584.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 21.7029 non-coding 
CPAT coding probability 4.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NXNL1-7:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NXNL1-3:7
5.0 lnc-NXNL1-3:7
5.1 lnc-PALM3-109:1
5.2 lnc-NXNL1-7:1