Transcript: lnc-NXNL1-7:4

Basic information

LNCipedia transcript ID: lnc-NXNL1-7:4 
LNCipedia gene ID: lnc-NXNL1-7
Ensembl Gene ID: ENSG00000269439
Ensembl Transcript ID: ENST00000615939
Location (hg38): chr19:17510100-17510850
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 751 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000615939.1
Alternative gene names: ENSG00000269439.5; CTD-3131K8.2; AC010618.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -29.1975 non-coding 
CPAT coding probability 0.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NXNL1-7:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-NXNL1-3:6
4.1 lnc-NXNL1-3:6
5.0 lnc-NXNL1-3:6
5.1 lnc-PALM3-109:4
5.2 lnc-NXNL1-7:4