Transcript: lnc-NXPE2-2:2

Basic information

LNCipedia transcript ID: lnc-NXPE2-2:2 
LNCipedia gene ID: lnc-NXPE2-2
RefSeq ID: NR_135108
Location (hg38): chr11:115333577-115340439
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 507 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135108.1
Alternative gene names: LOC105369509


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -97.3481 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NXPE2-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-PTS-50:2
5.1 lnc-PTS-50:2
5.2 lnc-NXPE2-2:2