Transcript: lnc-NXPH1-2:19

Basic information

LNCipedia transcript ID: lnc-NXPH1-2:19 
LNCipedia gene ID: lnc-NXPH1-2
Location (hg38): chr7:8262215-8263913
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1444 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000244239.1|FTMT22700030836.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -123.5456 non-coding 
CPAT coding probability 0.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NXPH1-2:19 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NXPH1-2:19
5.0 lnc-NXPH1-2:19
5.1 lnc-SLC29A4-50:7
5.2 lnc-NXPH1-2:19