Transcript: lnc-NXPH1-2:8

Basic information

LNCipedia transcript ID: lnc-NXPH1-2:8 
LNCipedia gene ID: lnc-NXPH1-2
Location (hg38): chr7:8303823-8348133
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 7624 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1806:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 36.9088 non-coding 
CPAT coding probability 23.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NXPH1-2:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-NXPH1-2:8
4.1 lnc-NXPH1-2:8
5.0 lnc-NXPH1-2:8
5.1 lnc-SLC29A4-50:18
5.2 lnc-NXPH1-2:8