Transcript: lnc-NXPH2-5:2

Basic information

LNCipedia transcript ID: lnc-NXPH2-5:2 
LNCipedia gene ID: lnc-NXPH2-5
RefSeq ID: NR_120402
Location (hg38): chr2:137878754-137927932
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1301 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120402; NR_120402.1
Alternative gene names: LOC101928273


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -35.3983 non-coding 
CPAT coding probability 0.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NXPH2-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NXPH2-5:2
4.0 lnc-NXPH2-5:2
4.1 lnc-NXPH2-5:2
5.0 lnc-NXPH2-5:2
5.1 lnc-PRSS40B-71:1
5.2 lnc-NXPH2-5:2