Transcript: lnc-NYAP1-1:1

Basic information

LNCipedia transcript ID: lnc-NYAP1-1:1 
LNCipedia gene ID: lnc-NYAP1-1
Location (hg38): chr7:100509365-100520043
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 631 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00013556; NONHSAT122381
Alternative gene names: XLOC_006192; linc-AGFG2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.0463 non-coding 
CPAT coding probability 0.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NYAP1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NYAP1-1:1
3.1 lnc-NYAP1-1:1
4.0 lnc-NYAP1-1:1
4.1 lnc-NYAP1-1:1
5.0 lnc-NYAP1-1:1
5.1 lnc-PILRA-8:2
5.2 lnc-NYAP1-1:1