Transcript: lnc-NYAP2-2:2

Basic information

LNCipedia transcript ID: lnc-NYAP2-2:2 
LNCipedia gene ID: lnc-NYAP2-2
Ensembl Gene ID: ENSG00000273301
Ensembl Transcript ID: ENST00000609089
Location (hg38): chr2:225698514-225703654
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5141 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609089.1
Alternative gene names: ENSG00000273301.1; RP11-314B1.2; AC016717.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.828 non-coding 
CPAT coding probability 1.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NYAP2-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NYAP2-2:2
4.0 lnc-NYAP2-2:2
4.1 lnc-NYAP2-2:2
5.0 lnc-NYAP2-2:2
5.1 lnc-MOGAT1-47:2
5.2 lnc-NYAP2-2:2