Transcript: lnc-OAF-1:10

Basic information

LNCipedia transcript ID: lnc-OAF-1:10 
LNCipedia gene ID: lnc-OAF-1
Location (hg38): chr11:120026753-120041187
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2959 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000004052.1|MICT00000068887.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 6.1724 non-coding 
CPAT coding probability 3.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OAF-1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AP000679.2.1-1:13
5.0 lnc-AP000679.2.1-1:13
5.1 lnc-HINFP-13:10
5.2 lnc-OAF-1:10