Transcript: lnc-OAF-4:2

Basic information

LNCipedia transcript ID: lnc-OAF-4:2 
LNCipedia gene ID: lnc-OAF-4
Location (hg38): chr11:119905347-119913754
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 836 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000004049.1|HBMT00000234212.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -224.868 non-coding 
CPAT coding probability 0.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OAF-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-CTD-2523D13.1.1-4:4
5.0 lnc-CTD-2523D13.1.1-4:4
5.1 lnc-HINFP-12:2
5.2 lnc-OAF-4:2