Transcript: lnc-OAZ1-3:1

Basic information

LNCipedia transcript ID: lnc-OAZ1-3:1 
LNCipedia gene ID: lnc-OAZ1-3
Location (hg38): chr19:2330295-2330759
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 392 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT060434
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.1333 non-coding 
CPAT coding probability 7.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OAZ1-3:1 no no no no

Available literature

  1. Mirza (2015), Transcriptomic landscape of lncRNAs in inflammatory bowel disease., Genome Med


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC004410.1-1:12
4.0 lnc-AC004410.1-1:12
4.1 lnc-AC004410.1-1:12
5.0 lnc-AC004410.1-1:12
5.1 lnc-RPL36-97:1
5.2 lnc-OAZ1-3:1