Transcript: lnc-OAZ3-2:1

Basic information

LNCipedia transcript ID: lnc-OAZ3-2:1 
LNCipedia gene ID: lnc-OAZ3-2
Ensembl Gene ID: ENSG00000234614
Ensembl Transcript ID: ENST00000434182
Location (hg38): chr1:151841877-151850385
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 506 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000434182.1; AL450992.2-001; OTTHUMT00000036680.1
Alternative gene names: ENSG00000234614.1; AL450992.2; OTTHUMG00000013071.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -47.8998 non-coding 
CPAT coding probability 1.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-OAZ3-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-OAZ3-2:1
4.0 lnc-OAZ3-2:1
4.1 lnc-OAZ3-2:1
5.0 lnc-OAZ3-2:1
5.1 lnc-PSMD4-20:27
5.2 lnc-OAZ3-2:1